Family GP016717


Family ID
GP016717  add to my list
Family name
Small nuclear ribonucleoprotein SmF family   suggest a name
Comment
Curation status ?
Taxonomic coverage
Magnoliopsida
Gene tree
Family level
2


(click on individual chart bar to display sequence composition below. Several bars can be selected and will remain highlighted)
Sequence total: 220
Species Sequence Count
2
4
3
4
18
10
9
3
2
7
2
2
3
2
6
9
3
2
2
3
1
8
4
5
4
3
5
3
7
4
3
9
4
2
4
6
2
6
11
2
2
5
2
5
6
11




Close InterPro family
IPR Annotation Type % Occurence Specificity
Sm-like protein Lsm6/SmF
IPR016487 		Sm-like protein Lsm6/SmF Family 83 (183) Yes
Small nuclear ribonucleoprotein F
IPR034100 		Small nuclear ribonucleoprotein F Family 46 (101) Yes

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
LSM domain, eukaryotic/archaea-type
IPR001163 		LSM domain, eukaryotic/archaea-type Domain 91 (200) No
LSM domain superfamily
IPR010920 		LSM domain superfamily Homologous_superfamily 93 (205) No

Close Representative InterPro domains - Consensus schema
IPR001163 IPR010920 IPR016487 IPR034100

Close Domain architecture
Clustering




Alignment available at level 1 family (
Sm-like protein Lsm6/SmF
GP001331 ).





Phylogeny tree available at level 1 family ( GP001331 ).