Family GP069973
Family ID
GP069973
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Family name
9-cis-epoxycarotenoid dioxygenase
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Synonym(s)
NCED
Cross-reference(s)
PMID:
Molecular characterization of the Arabidopsis 9-cis epoxycarotenoid dioxygenase gene family.
12834401
Comment
Chloroplastic, no intron in Arabidopsis. 11, 12 9-cis cleavage activity found for Arabidopsis sequences, except for At4g19170
Curation status ?
Taxonomic coverage
Gene tree
Family level
4
Sequence total: 289
Species | Sequence Count |
---|---|
4 | |
6 | |
4 | |
4 | |
13 | |
11 | |
10 | |
2 | |
6 | |
9 | |
4 | |
5 | |
6 | |
5 | |
4 | |
5 | |
3 | |
4 | |
4 | |
9 | |
3 | |
3 | |
3 | |
6 | |
6 | |
4 | |
8 | |
7 | |
13 | |
6 | |
5 | |
8 | |
8 | |
10 | |
3 | |
6 | |
3 | |
3 | |
9 | |
4 | |
6 | |
4 | |
10 | |
5 | |
10 | |
18 |
InterPro family
IPR | Annotation | Type | % | Occurence | Specificity |
---|---|---|---|---|---|
Carotenoid oxygenase
IPR004294
|
Carotenoid oxygenase | Family | 98 | (283) | No |
Other InterPro signatures
No other significant IPR (i.e. > 25%)
Representative InterPro domains - Consensus schema
Domain architecture