Family GP000489


Family ID GP000489  add to my list RDF
Family name Nmra-like family   suggest a name
Synonym(s) Isoflavone reductase, Isoflavone reductase homolog
Cross-reference(s) PMID:
A maize gene encoding an NADPH binding enzyme highly homologous to isoflavone reductases is activated in response to sulfur starvation.
8597660 PMID:
Expression of an isoflavone reductase-like gene enhanced by pollen tube growth in pistils of Solanum tuberosum.
9106515 PMID:
Arabidopsis thaliana NADPH oxidoreductase homologs confer tolerance of yeasts toward the thiol-oxidizing drug diamide.
7592828
Curation status ?
Found in Viridiplantae
Phylogenetic analyzes Did not pass filtration




Clustering level Family ID (number of sequences)
1
Nmra-like family (plant-specificity: 19%)
GP000489 (620)
2 GP015389 (619)
3 GP040053 (618) , GP055332 (4)
4 GP069544 (618) , GP087184 (4)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 620
Species Count (w/o splice) Count (w/ splice)
2 2
9 9
104 104
16 16
8 8
7 7
18 18
13 13
14 18
8 8
9 9
12 12
7 10
8 10
28 28
10 10
10 10
21 21
8 8
6 6
20 20
12 29
10 10
22 38
10 10
21 21
10 12
32 32
17 17
19 21
7 7
19 21
28 37
18 18


Information to display




(click on chart bars above to get species proteins)


Close InterPro family

No IPR family


Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
NmrA-like
IPR008030
NmrA-like Domain 93 (578) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR008030


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Species
Information to display
?


(click on the button above to get your protein list)


Alignment not available.
[Masking step 1 details] [Masking step 2 details] [Filtration details] [Global HMM file]

Phylogeny tree not available.


Alignment and filtration statistics:

Overall family sequences Sequences used for alignment (w/o splice) Sequences kept after filtration [min; median; max] ~average sequence length Alignment length Masked alignment length
620 562 (91%) 434 (70%) [53; 308; 1152] ~260 3891 241