Family GP000022


Family ID GP000022  add to my list RDF
Family name Subtilisin-like Serine Proteases family   suggest a name
Synonym(s) Peptidase S8/S53, Cucumisin
Cross-reference(s) PMID:
A nodule-specific gene encoding a subtilisin-like protease is expressed in early stages of actinorhizal nodule development.
7647567 PMID:
Cucumisin, a serine protease from melon fruits, shares structural homology with subtilisin and is generated from a large precursor.
7806492 PMID:
Identification of Cucumisin (Cuc m 1), a subtilisin-like endopeptidase, as the major allergen of melon fruit.
12801320
Family Ontology
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N/A
Curation status ?
Found in Viridiplantae
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
Subtilisin-like Serine Proteases family
GP000022 (3237)
2
Subtilisin-like Serine Proteases family
GP015064 (3152) ,
(plant-specificity: 100%)
GP022788 (49) ,
(plant-specificity: 80%)
GP024311 (11) , GP111975 (7) , GP112494 (6) ,
(plant-specificity: 100%)
GP027825 (6) , GP115741 (4)
3 GP039788 (3058) , GP042721 (89) ,
(plant-specificity: 100%)
GP048088 (49) ,
(plant-specificity: 55%)
GP048733 (60) ,
(plant-specificity: 80%)
GP049994 (9) , GP123503 (6) ,
(plant-specificity: 100%)
GP054631 (6) , GP124342 (5) , GP125794 (4) , GP061273 (2)
4 GP069316 (3056) , GP072593 (79) , GP078042 (49) ,
(plant-specificity: 80%)
GP080375 (9) ,
(plant-specificity: 100%)
GP084212 (7) , GP137887 (6) ,
(plant-specificity: 100%)
GP086349 (6) , GP139020 (5) ,
(plant-specificity: 100%)
GP139281 (5) , GP140951 (4) , GP141803 (4)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 3237
Species Count (w/o splice) Count (w/ splice)
12 12
24 30
96 96
149 149
106 106
94 94
81 81
151 151
72 72
74 86
68 71
65 65
85 85
63 82
67 67
76 76
106 106
101 101
92 92
57 64
66 66
90 90
72 104
63 63
93 135
79 79
75 75
47 53
197 197
136 136
140 141
86 86
67 75
133 158
93 93


Information to display




(click on chart bars above to get species proteins)


Close InterPro family
IPR Annotation Type % Occurence Specificity
Peptidase S8, subtilisin-related
IPR015500
Peptidase S8, subtilisin-related Family 62 (2013) No

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Peptidase S8/S53 domain
IPR000209
Peptidase S8/S53 domain Domain 83 (2677) No
Proteinase inhibitor I9
IPR010259
Proteinase inhibitor I9 Domain 65 (2114) No
Peptidase S8, subtilisin, Ser-active site
IPR023828
Peptidase S8, subtilisin, Ser-active site Active_site 56 (1820) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR000209 IPR010259 IPR023828 IPR015500


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Species
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