Family GP000642


Family ID GP000642  add to my list RDF
Family name Beta-fructofuranosidase family   suggest a name
Synonym(s) Beta-fructofuranosidase insoluble isoenzyme , glycoside hydrolase family 32
Cross-reference(s) PMID:
Roles of cell-wall invertases and monosaccharide transporters in the growth and development of Arabidopsis.
12508063 PMID:
Unraveling the difference between invertases and fructan exohydrolases: a single amino acid (Asp-239) substitution transforms Arabidopsis cell wall invertase1 into a fructan 1-exohydrolase.
17873089
Family Ontology
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molecular_function
beta-fructofuranosidase activity
GO:0004564 (19%) - beta-fructofuranosidase activity
sucrose alpha-glucosidase activity
GO:0004575 (19%) - sucrose alpha-glucosidase activity
Curation status ?
Found in Viridiplantae
Phylogenetic analyzes Did not pass filtration




Clustering level Family ID (number of sequences)
1
Beta-fructofuranosidase family
GP000642 (505)
2 GP015537 (502) , GP029509 (3)
3 GP040204 (502) , GP056810 (3)
4 GP069668 (501) , GP089081 (3)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 505
Species Count (w/o splice) Count (w/ splice)
5 5
10 15
7 7
23 23
6 6
9 9
7 7
10 10
7 7
11 16
13 15
26 26
15 15
11 22
13 15
13 13
14 14
13 13
8 8
8 13
8 8
20 20
15 43
11 11
8 20
6 6
10 10
7 8
9 9
26 26
17 17
10 10
12 14
25 35
9 9


Information to display




(click on chart bars above to get species proteins)


Close InterPro family
IPR Annotation Type % Occurence Specificity
Glycoside hydrolase, family 32
IPR001362
Glycoside hydrolase, family 32 Family 84 (424) No

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Concanavalin A-like lectin/glucanases superfamily
IPR008985
Concanavalin A-like lectin/glucanases superfamily Domain 79 (399) No
Glycosyl hydrolase family 32, N-terminal
IPR013148
Glycosyl hydrolase family 32, N-terminal Domain 87 (437) No
Glycosyl hydrolase family 32, C-terminal
IPR013189
Glycosyl hydrolase family 32, C-terminal Domain 74 (375) No
Glycosyl hydrolase, five-bladed beta-propellor domain
IPR023296
Glycosyl hydrolase, five-bladed beta-propellor domain Domain 87 (438) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR008985 IPR013189
Glycoside hydrolase, family 32, active site
IPR018053 IPR013148 IPR023296 IPR001362



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Species
Information to display
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Alignment not available.
[Masking step 1 details] [Masking step 2 details] [Filtration details] [Global HMM file]

Phylogeny tree not available.


Alignment and filtration statistics:

Overall family sequences Sequences used for alignment (w/o splice) Sequences kept after filtration [min; median; max] ~average sequence length Alignment length Masked alignment length
505 422 (84%) 348 (69%) [37; 561; 1993] ~506 4237 434