Family GP126398

Family ID GP126398  add to my list RDF
Family name Unannotated cluster   suggest a name
Curation status ?
Found in Solanum
Phylogenetic analyzes Not available

Clustering level Family ID (number of sequences)
MADS transcription factor family (plant-specificity: 60%)
GP000028 (4022)
(plant-specificity: 97%)
GP025797 (33)
3 GP126398 (4)
4 GP141956 (4)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.

  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.

Sequence total: 4
Species Count (w/o splice) Count (w/ splice)
3 3
1 1

Information to display

(click on chart bars above to get species proteins)

Close InterPro family

No IPR family

Close Other InterPro signatures

No other significant IPR (i.e. > 25%)

Close Domain architecture

Close Representative InterPro domains - Consensus schema
Transcription factor, MADS-box

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Information to display

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