Gene Ca_64_447.2


Sequence ID Ca_64_447.2  add to my list
Species Coffea arabica
Alias No gene alias
Length 227aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 227 amino acids

>Ca_64_447.2_COFAR
MSKEEKKEKEKVKVKEKEIEVITAVYKINLHCPKCAHDIRRPLLRIPGVHSADIKHEKNE
VTIKGAIVAKKMHERLQKWSKKKVELISETKVKEAEKGAKETKKETIKTILIKSYMHCAE
CEREIRKRLLKHKGIHNVKTDIKAQTISIEGVIESEKLLTYMRKKVHKYAEIIPPKAKEK
EKEKKDEKKEKEKIEVKIVEFKEVEKVAAKTKEGDTPYFVHYVYAPQ




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015545		 Heavy metal transport/detoxification group1
3 GP342504 Unannotated cluster
4 GP464372 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for Ca_64_447.2



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Cc02_g26130 orthology 0.0011 1 347.4 6e-96
DCAR_029550 orthology 0.517 4 234.2 9.2e-62
HanXRQChr06g0168381 orthology 0.596 5 176.8 2.5e-44
Oeu036922.1 orthology 0.28 2 - -
PGSC0003DMP400011529 orthology 0.507 6 196.4 2e-50
Solyc10g039390.1.1 orthology 0.56 6 208.8 3.9e-54
capan_pan_p023451 orthology 0.534 5 129 1.78e-38
ipotf_pan_p011107 orthology 0.466 5 214 2.82e-70
itb09g19040.t1 orthology 0.489 5 119.4 3.4e-27