Gene Ca_78_52.3
| Sequence ID | Ca_78_52.3 add to my list | ||
|---|---|---|---|
| Species | Coffea arabica | ||
| Alias | No gene alias | ||
| Length | 279aa | ||
| Gene Ontology |
 Display term(s) (1)
|
Length: 279 amino acids
>Ca_78_52.3_COFAR MSRNEEFQLTHVLKVQIHCDGCARKVKKLLKRIEGVYVVSIDCEEQKVKVSGTVDCATLI RKLMKAGKHAELWRPRTRQFQSLQELSNWPPSDKYENSLQYLPDGVGASNIQPKLASVYD RGIDDWALERYLDENAGIKTLMGENNNRALAVGNNAPLAWNGDVVPDVQSLVGKLRPTDF PDSSKYAGDFAGYEDRGYPGLQHLQSRPAYEHYYSPFMMRNNMQQYQYKLPTPVMMNNAI PDMHANYNPMMNDITYLHQTQGTLNPVSPTLTPYSWNYY
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | GP023608 | Unannotated cluster |
| 3 | GP040483 | Unannotated cluster |
| 4 | GP070015 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
|
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for Ca_78_52.3
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| HanXRQChr16g0503581 | orthology | 1 | 2 | - | - |
| Oeu028920.1 | orthology | 0.955 | 1 | 123.6 | 3e-28 |