Gene Cc02_g03920
| Sequence ID | Cc02_g03920 add to my list |
|---|---|
| Species | Coffea canephora |
| Alias | No gene alias |
| Length | 291aa |
| Gene Annotation | Probable rRNA-processing protein EBP2 homolog |
Length: 291 amino acids
>Cc02_g03920_COFCA MLDEENINDLGMEDPDNEVIDSEPESEGDEDVKLAEPSKTAVNNRDGLLDKLGDISWPEN VGWIHKLSVDIDREQEVDVNDDLTRELAFYTQALEGTRQAFLEFQSMGIPFLRPSDYYAE MVKSDAHMEKVKGRLLAEKRKIEESEERRKARENKKIAKEVQAQKLKERAKQKKEEIESV KKWRKNRQHSGFAGGDKDGDLDFAFEDGKAFERSNKKQPGVAPGDRSGGKAGKGGGRRGM KGPDKNRKNREFRNSKFGYGGRKGLNKQNTSETTSDVRGFNGNFSGRKRKR
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Unknown function duf1138 family
GP002478 |
Unknown function duf1138 family |
| 2 | GP018276 | Unannotated cluster |
| 3 | GP042981 | Unannotated cluster |
| 4 | GP075980 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Eukaryotic rRNA processing
IPR008610
|
Eukaryotic rRNA processing | Family |
Figure 1: IPR domains for Cc02_g03920
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| Ca_2_642.2 | orthology | 0 | 1 | 357.8 | 1.7e-98 |
| Ca_71_385.1 | orthology | 0 | 1 | - | - |