Gene Cc08_g17060


Sequence ID Cc08_g17060  add to my list
Species Coffea canephora
Alias No gene alias
Length 189aa
Gene Annotation Putative Heavy metal-associated isoprenylated plant protein 26
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 189 amino acids

>Cc08_g17060_COFCA
MVNLPERLFGFVVSALAYCFFQYHHHQDSNYHHPKSSNNDNISYKMPKTKARPLSLQTVE
LKVRMCCSGCERVVKDAIHKLRGVDSVDVELEMEKVTVIGYVDRNKVLTAVRRAGKRAEF
WPYPNPPLYFTSTTNYFKDTTSDFKESYNYWRHGYNAADRHGSLPVTQRGDDKVSNMFND
DNVNACCLM





Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323
Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015397
Heavy metal transport/detoxification group1
3 GP040065 Unannotated cluster
4 GP078604 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121
Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163
Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for Cc08_g17060



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Ca_51_306.2 orthology 0.0228 1 289.7 3.7e-78
PGSC0003DMP400008918 orthology 0.333 3 - -
capan_pan_p004350 orthology 0.29 3 - -