Gene Cc11_g08860
Sequence ID | Cc11_g08860 add to my list | ||
---|---|---|---|
Species | Coffea canephora | ||
Alias | No gene alias | ||
Length | 416aa | ||
Gene Annotation | Putative uncharacterized protein | ||
Gene Ontology |
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Length: 416 amino acids
>Cc11_g08860_COFCA MSKDEDFKLLKIQTCALRVNIHCDGCKQKVKKLLQRIEGVYQVSIDAEQQKVTVSGGLDS ATLIKKLVRAGKHAELWSQTTNQNQKQQKANCNKDDKNNNKGQKQQQGLIKGLEALKNQQ KFAFNLEEDEDFLDEEEDEDEEEEELRFLREKANQINLLRQQTAAMQGKNAKNGFGQAMA AAAAASNNGKMPNNSGNVNAGKKANHQPNQNMGMKGNPGGIDQKTMQALKMNNAQFAGGG NIINPGEAKIGNDISSMMNLAGFHGDGGANNFASVLGGNAASTGSGAVYHHQLQPNNQAF VNSSPAGFPTAGMAAGHHPSAMMVNMNGNGVYNQPSSQSMLMNLQNRHAMQQPQMMYNRS PYIPTSTGYYYGYGPAAVLPPYHSYMGSDPSYYNTADQSASAHMFSDENTSSCSIM
Clustering Level | Family ID | Family Name |
---|---|---|
1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
2 | GP023608 | Unannotated cluster |
3 | GP040483 | Unannotated cluster |
4 | GP070015 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
ID | Name | Type |
---|---|---|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for Cc11_g08860
Homology | RBH | ||||
---|---|---|---|---|---|
Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
Ca_39_644.1 | orthology | 0 | 1 | 672.5 | 4.4e-193 |
Ca_81_165.8 | orthology | 0 | 1 | - | - |
DCAR_007286 | orthology | 0.589 | 3 | - | - |
DCAR_030213 | orthology | 0.553 | 3 | 216.9 | 2.8e-56 |
PGSC0003DMP400053180 | orthology | 0.564 | 6 | 137.1 | 2.7e-32 |
Solyc05g008300.1.1 | orthology | 0.553 | 6 | - | - |
capan_pan_p003259 | orthology | 0.504 | 5 | 233 | 1.51e-72 |
ipotf_pan_p020764 | orthology | 0.601 | 5 | 252 | 4.36e-80 |
itb14g01030.t1 | orthology | 0.61 | 5 | 222.2 | 6.8e-58 |