Gene Cm080580.1
| Sequence ID | Cm080580.1 add to my list | ||
|---|---|---|---|
| Species | Citrus medica | ||
| Alias | No gene alias | ||
| Length | 524aa | ||
| Gene Ontology |
 Display term(s) (1)
|
Length: 524 amino acids
>Cm080580.1_CITME MSKEEFMKIQTYVLKVNIHCDGCKHKVKKILQKIDGVFTTSIDSEQGKVTVSGNVDPSVL IKKLAKSGKHAELWGGQKANNNQNNLPNQFKNMQLDNGKGGNNNNNNKGQKGGNNNNNIN NQPKGGGGGGGGGGGGGPQPNPQQQLQQQLQHLQQIKGFQDLKLPPHFKDMKLPSMPNQN QNQNQKAVKFNIPDDDEDLSDFDDDEFDYDEYDDEYDDDLDEPLPPLNKMKPIMGNGGPP GMMPNMMMNGINPQLMNAQKGAPIPAQNAKKGGNGGPMPVQVNMASNEGKNGNGGKKGGG GGNQNGGNNQNQGGKNNGKNGGQNGNNGGGGGGGGGGANNKNGNNGGGANGHNMNGNGGK KGNGGPNPMGDMNGGFQNMGGAAAAMAAANAKMGQMPMGQMGSMPMGQMGSIPAVQGLPA AAMSGGAGGGAGYFQGAGPDLMPGNPYHQQQQQQYMAAAMMNQQRAIGNERFQPMMYARP PPAVNYMPQHPYPPYPYPQHPYPPQDPGYTHFFSDENTSSCNVM
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | GP023608 | Unannotated cluster |
| 3 | GP040483 | Unannotated cluster |
| 4 | GP070015 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
|
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for Cm080580.1
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| Cg9g004610.1 | orthology | 0.0133 | 1 | 453.8 | 1.4e-127 |
| Cs9g06110.1 | orthology | 0.028 | 2 | 438.3 | 6.8e-123 |
| FvH4_4g14520.1 | orthology | 0.371 | 4 | 174.5 | 1.8e-43 |
| MELO3C006564.2.1 | orthology | 0.565 | 7 | 189.1 | 6e-48 |
| Manes.03G184400.1 | orthology | 0.426 | 5 | 199.1 | 7.7e-51 |
| Manes.15G023400.1 | orthology | 0.428 | 5 | 325 | 1.28e-105 |
| cajca.ICPL87119.gnm1.ann1.C.cajan_04403.1 | orthology | 0.607 | 8 | 207 | 1.08e-61 |
| cajca.ICPL87119.gnm1.ann1.C.cajan_04404.1 | orthology | 0.74 | 8 | - | - |
| cajca.ICPL87119.gnm1.ann1.C.cajan_05307.1 | orthology | 0.478 | 7 | - | - |
| cicar_pan_p021612 | orthology | 0.543 | 7 | 203 | 1.78e-59 |
| cicar_pan_p023752 | orthology | 0.482 | 7 | - | - |
| cucsa_pan_p014828 | orthology | 0.579 | 7 | - | - |
| maldo_pan_p033071 | orthology | 0.341 | 4 | 288 | 6.37e-91 |
| medtr_pan_p010037 | orthology | 0.498 | 7 | 228 | 2.51e-68 |
| medtr_pan_p012132 | orthology | 0.539 | 7 | - | - |
| medtr_pan_p023169 | orthology | 0.913 | 6 | - | - |
| phavu.G19833.gnm2.ann1.Phvul.003G092500.1 | orthology | 0.554 | 7 | 138.3 | 1.4e-32 |
| phavu.G19833.gnm2.ann1.Phvul.006G153400.1 | orthology | 0.53 | 8 | 254 | 1.7e-78 |
| soybn_pan_p017385 | orthology | 0.485 | 8 | - | - |
| soybn_pan_p023921 | orthology | 0.464 | 8 | - | - |
| soybn_pan_p028758 | orthology | 0.515 | 8 | - | - |
| soybn_pan_p032758 | orthology | 0.537 | 8 | 272 | 2.99e-85 |
| thecc_pan_p006423 | orthology | 0.416 | 5 | 297 | 7.14e-95 |