Gene Cs5g32830.1


Sequence ID Cs5g32830.1  add to my list
Species Citrus sinensis
Alias No gene alias
Length 286aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 286 amino acids

>Cs5g32830.1_CITSI
MAAKVADDQPPHPHPLQFQTWVLKVLIHCEGCKKKVTKILKGIEGVYTAVIDSQQHKVTV
IGNVDAETLIKKLLRSGKHAELWPEKKDKTSGKSKNNDKQKELSKDGQEVLDDRHKDTAE
KPDEKSGDNPPGTGIEGQGGNGSGGKKKKKKKGNSSGTGGSGENVGNEPAAGITGSPAVA
AAVDPIPSEVAPIPRHQQQYPSPPFMQQEHPPMYYPPHPAPLHGVSYNTTYPTASTSYYA
PSMHAYYNSSYHRPGRYIPPDPIHKFTEDDHGYYDNDEGTAGCSIM





Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323
Heavy metal transport/detoxification protein superfamily
2 GP023608 Unannotated cluster
3 GP040483 Unannotated cluster
4 GP070015 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121
Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163
Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for Cs5g32830.1



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Cg5g037020.1 orthology 0.0121 2 494.6 4e-140
Cm177940.1 orthology 0.0178 1 483.8 1.2e-136
FvH4_2g25240.1 orthology 1 8 111.7 7.7e-25
FvH4_3g05420.1 orthology 1 8 - -
Manes.01G216400.1 orthology 0.937 6 153.7 2e-37
Manes.05G064600.1 orthology 1 6 - -
cajca.ICPL87119.gnm1.ann1.C.cajan_10299.1 orthology 0.964 5 120.6 1.9e-27
cicar_pan_p013771 orthology 0.999 5 120 4.01e-32
maldo_pan_p006711 orthology 1 8 125 1.95e-33
maldo_pan_p033280 orthology 0.976 8 - -
medtr_pan_p025269 orthology 1 5 140 1.46e-39
phavu.G19833.gnm2.ann1.Phvul.001G205300.1 orthology 1 6 120.9 1.3e-27
soybn_pan_p005697 orthology 0.969 6 - -
soybn_pan_p010098 orthology 0.994 6 121 3.77e-32
thecc_pan_p017549 orthology 0.54 3 155 2.29e-45
vitvi_pan_p002541 orthology 0.932 7 140 3.77e-40