Gene FvH4_4g32260.1


Sequence ID FvH4_4g32260.1  add to my list
Species Fragaria vesca
Alias No gene alias
Length 414aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 414 amino acids

>FvH4_4g32260.1_FRAVE
MTKDEDFKLLKIQTCYLKVNIHCDGCKQKVKKLLQRIEGVYEVSIDADQQKVTVSGVIDS
ANLIKKLVRAGKHAELWNQQKANQNQNQKQKNNICIKDNKGQKQQGGMIKGLEAFKNQQP
QQKFPHFFTEEDINDLLEDEEEDEKDELRLLMRQKVNQLRHQSIDVNNNGRKGAAAAANP
NNSVKITNNHNAGKKGVQHQNQNVQGMKVINPGGIDPKTMAALNMSNIAQLGAQLGGEAK
RGNNNDLSTMMNLAGFHGNGATNAASAAGLGGNVAHANSLAAFQQALQSQQSQAGGSAYQ
AQSASGGFPSGGYATGQYPQTMMMNTNGYGHPSQMMNMNMQQARQQAIQQQQPQMMYHRS
PYIPPSTTGYYPNYGPIPSSAPYPYTAEPNYGGDDGNNAAHMFNDENTSSCSIM





Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323
Heavy metal transport/detoxification protein superfamily
2 GP023608 Unannotated cluster
3 GP040483 Unannotated cluster
4 GP070015 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121
Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163
Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for FvH4_4g32260.1



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Cg2g033940.2 orthology 0.385 4 230.7 1.6e-60
Cm053230.1 orthology 0.39 5 241.9 1.1e-63
Manes.15G126600.1 orthology 0.46 4 270.4 2.1e-72
Manes.17G075400.1 orthology 0.447 4 - -
cajca.ICPL87119.gnm1.ann1.C.cajan_07848.1 orthology 0.515 5 282.3 5.4e-76
cicar_pan_p014991 orthology 0.522 5 232 9.46e-73
maldo_pan_p009716 orthology 0.32 1 - -
maldo_pan_p033106 orthology 0.353 1 324 2.62e-108
medtr_pan_p032193 orthology 0.53 5 286 1.4e-93
orange1.1t04788.1 orthology 0.392 5 231.1 1.3e-60
phavu.G19833.gnm2.ann1.Phvul.007G038000.1 orthology 0.525 6 223.4 2.7e-58
soybn_pan_p012384 orthology 0.494 6 298 5.05e-98
soybn_pan_p023139 orthology 0.488 6 - -
thecc_pan_p016247 orthology 0.434 4 318 4.51e-106
vitvi_pan_p018179 orthology 0.391 3 320 6.03e-107
vitvi_pan_p040075 orthology 0.432 3 - -