Gene FvH4_4g32260.1
| Sequence ID | FvH4_4g32260.1 add to my list | ||
|---|---|---|---|
| Species | Fragaria vesca | ||
| Alias | No gene alias | ||
| Length | 414aa | ||
| Gene Ontology |
 Display term(s) (1)
|
Length: 414 amino acids
>FvH4_4g32260.1_FRAVE MTKDEDFKLLKIQTCYLKVNIHCDGCKQKVKKLLQRIEGVYEVSIDADQQKVTVSGVIDS ANLIKKLVRAGKHAELWNQQKANQNQNQKQKNNICIKDNKGQKQQGGMIKGLEAFKNQQP QQKFPHFFTEEDINDLLEDEEEDEKDELRLLMRQKVNQLRHQSIDVNNNGRKGAAAAANP NNSVKITNNHNAGKKGVQHQNQNVQGMKVINPGGIDPKTMAALNMSNIAQLGAQLGGEAK RGNNNDLSTMMNLAGFHGNGATNAASAAGLGGNVAHANSLAAFQQALQSQQSQAGGSAYQ AQSASGGFPSGGYATGQYPQTMMMNTNGYGHPSQMMNMNMQQARQQAIQQQQPQMMYHRS PYIPPSTTGYYPNYGPIPSSAPYPYTAEPNYGGDDGNNAAHMFNDENTSSCSIM
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | GP023608 | Unannotated cluster |
| 3 | GP040483 | Unannotated cluster |
| 4 | GP070015 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
|
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for FvH4_4g32260.1
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| Cg2g033940.2 | orthology | 0.385 | 4 | 230.7 | 1.6e-60 |
| Cm053230.1 | orthology | 0.39 | 5 | 241.9 | 1.1e-63 |
| Manes.15G126600.1 | orthology | 0.46 | 4 | 270.4 | 2.1e-72 |
| Manes.17G075400.1 | orthology | 0.447 | 4 | - | - |
| cajca.ICPL87119.gnm1.ann1.C.cajan_07848.1 | orthology | 0.515 | 5 | 282.3 | 5.4e-76 |
| cicar_pan_p014991 | orthology | 0.522 | 5 | 232 | 9.46e-73 |
| maldo_pan_p009716 | orthology | 0.32 | 1 | - | - |
| maldo_pan_p033106 | orthology | 0.353 | 1 | 324 | 2.62e-108 |
| medtr_pan_p032193 | orthology | 0.53 | 5 | 286 | 1.4e-93 |
| orange1.1t04788.1 | orthology | 0.392 | 5 | 231.1 | 1.3e-60 |
| phavu.G19833.gnm2.ann1.Phvul.007G038000.1 | orthology | 0.525 | 6 | 223.4 | 2.7e-58 |
| soybn_pan_p012384 | orthology | 0.494 | 6 | 298 | 5.05e-98 |
| soybn_pan_p023139 | orthology | 0.488 | 6 | - | - |
| thecc_pan_p016247 | orthology | 0.434 | 4 | 318 | 4.51e-106 |
| vitvi_pan_p018179 | orthology | 0.391 | 3 | 320 | 6.03e-107 |
| vitvi_pan_p040075 | orthology | 0.432 | 3 | - | - |