Gene FvH4_7g28160.1
| Sequence ID | FvH4_7g28160.1 add to my list |
|---|---|
| Species | Fragaria vesca |
| Alias | No gene alias |
| Length | 300aa |
Length: 300 amino acids
>FvH4_7g28160.1_FRAVE MAVSKKESMMVNEEEMEDDSDMGDDVSDSELEQESEEESEEEGDVRLAEPSQNATYNKDG LLEKLADMSWPENAKWIDKLTLDIDQEQPVDVNDDLTRELAFYTQALNGTRMAFEKLQGM GLPFLRPEDYYAEMVKSDSHMEKVKSRLLVEKKNMEEAEERRKAREAKKLSKEIQNQKLK ERAKQKKESIESVKKWRKQRQQSGFAGGDKGSELDSVFEDGKPFEKSSKKRPGVAPGDRS GGKAKYAGKGKKPKKREVKDSKFGFGGRKGSRKQNVAETTNDLRGFNKQEGFSKNKKRKM
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Unknown function duf1138 family
GP002478 |
Unknown function duf1138 family |
| 2 | GP018276 | Unannotated cluster |
| 3 | GP042981 | Unannotated cluster |
| 4 | GP075980 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Eukaryotic rRNA processing
IPR008610
|
Eukaryotic rRNA processing | Family |
Figure 1: IPR domains for FvH4_7g28160.1
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| Cg9g025540.1 | orthology | 0.488 | 4 | 205.7 | 3.9e-53 |
| Cg9g025620.1 | orthology | 0.511 | 6 | - | - |
| Cm168920.1 | orthology | 0.521 | 5 | - | - |
| Cm169010.1 | orthology | 0.501 | 4 | 204.9 | 1.1e-52 |
| Cs9g15980.1 | orthology | 0.487 | 4 | 276 | 9.73e-93 |
| Cs9g16070.1 | orthology | 0.504 | 4 | 216.9 | 1.8e-56 |
| MELO3C005417.2.1 | orthology | 0.45 | 4 | 232.3 | 3.5e-61 |
| Manes.06G137800.1 | orthology | 0.498 | 4 | 229.9 | 2.3e-60 |
| cucsa_pan_p004862 | orthology | 0.475 | 4 | 301 | 1.62e-102 |
| maldo_pan_p003250 | orthology | 0.266 | 1 | - | - |
| maldo_pan_p017357 | orthology | 0.256 | 1 | 338 | 6.86e-115 |
| orange1.1t05624.1 | orthology | 0.511 | 6 | - | - |
| thecc_pan_p002991 | orthology | 0.436 | 3 | 301 | 1.59e-102 |