Gene HORVU3Hr1G004420.1


Sequence ID HORVU3Hr1G004420.1  add to my list
Species Hordeum vulgare
Alias No gene alias
Length 428aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 428 amino acids

>HORVU3Hr1G004420.1_HORVU
MTDGCTSQNMLHWSPVLLCRNFYHGSRATCEPSPSASLRVCGCVVVGVYSVAIDVDNHKV
TVTGSVDSEALIRKLTRGGKHAELWSHHKGGSNNSNQGHKGGNNNQQKQQQQQQQKQAVN
VSKDGGGGNKGNGGQKEQGKHGGGGGGMGSLMQGLKAFKSQHGKHQLPDLSSDDDDDMYD
DEDDEDDDEFDDEYEDDLRFLGDKMSQLGILRQRAEAAAAVNAKNKNGSNAANAGGKKGA
PAGNNHHQNNNQNQKMNMGAAAANAKMGNGAQKNAGGGIGGLMGMNHGLGTGGAPPGIQA
YTGGGFSHPSSYGAAGYGGLQQQQQQQQNGNLMASMQGYHNNPAAAAAMMNNLRGNMMMH
QPQPQPQPQMMYHRSPQISPYTAYYNPYSYYYQQPGGGGASAYHPGGAGTGDVETMFSDE
NTKGCAIM





Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323
Heavy metal transport/detoxification protein superfamily
2 GP023608 Unannotated cluster
3 GP040483 Unannotated cluster
4 GP070015 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121
Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163
Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for HORVU3Hr1G004420.1



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Dr15259 orthology 0.898 3 - -
Mba02_g23430.1 orthology 1 4 - -
Mba03_g01140.1 orthology 0.881 4 93.2 1.09e-20
Mba10_g22160.1 orthology 0.931 4 - -
XP_008806263.1 orthology 0.733 3 86.3 3.09e-18
XP_010916342.1 orthology 0.772 5 - -
XP_010926063.1 orthology 0.757 4 - -
XP_019707202.1 orthology 0.757 4 - -
XP_026656869.1 orthology 0.78 4 - -
cocnu_pan_p016981 orthology 0.769 4 - -
cocnu_pan_p021838 orthology 0.75 5 - -
cocnu_pan_p035969 orthology 0.75 5 - -
musac_pan_p029655 orthology 0.992 4 - -
musac_pan_p029948 orthology 0.927 4 - -
musac_pan_p030748 orthology 0.864 3 - -
musac_pan_p032325 orthology 0.863 4 - -
tritu_pan_p033683 orthology 0.091 1 - -
tritu_pan_p038784 orthology 0.0804 1 415 2.59e-143
tritu_pan_p048092 orthology 0.0919 1 - -