Gene HORVU4Hr1G072060.1


Sequence ID HORVU4Hr1G072060.1  add to my list
Species Hordeum vulgare
Alias F2E8Z2
Length 537aa
PubMed References
Open Display PubMed Reference(s) (1)
Accession Description
Comprehensive sequence analysis of 24,783 barley full-length cDNAs derived from 12 clone libraries.
21415278 		Comprehensive sequence analysis of 24,783 barley full-length cDNAs derived from 12 clone libraries.
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 537 amino acids

>HORVU4Hr1G072060.1_HORVU
LRLRLFIPARAALPFCFVSFRLAWLGFPSPAPPSNTRALALAHTCRRPAQEGGRAQRQPE
RATERSLASSVSMGAGKEAPGGGGVEGAAEPPPVVLRMELHCAGCAKKVRKSIRGMPGVQ
SVVADAAANRVVVAGTADAAALKARIESRTKKPVEIVSSGAGPGPAKPPAAAPAPAGAEK
SSPDKEGDKENPDKGGGGADKGDKAGASKPQPPKEEEDAAKKQPPTHAEEKKPAAELQVG
TQAACPPPTQCSAPNHHHHYHARPTDLAAHRVPASVLLSQESTVLLRIRLHCDGCADRIR
RRIYKIKGVKEVVLEGNAKDEVKVTGTMDVAAMVAYLTEKLNRAVEAVAPGNKDKGGGDE
KKDNKSASDGEKKMDKAAGGDHVVMSQDKGKGIEVAGPSMASAAASMAPAPVQARTHHVS
PYGQVPYLQPQGPPPSYYSPYGGNADGAGYTGAGGYYQQQQHPGGYYQQQQHPGGYYQQQ
HPGADAGGYYQQPREAGGYYQQDNPNPQGAYPPPYHFDTAPPPQMFSDENPNSCSVM




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015545		 Heavy metal transport/detoxification group1
3 GP040674 Unannotated cluster
4 GP070448 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for HORVU4Hr1G072060.1



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
tritu_pan_p009617 orthology 0.0962 1 - -
tritu_pan_p030498 orthology 0.0998 1 - -
tritu_pan_p043509 orthology 0.0974 1 507 1.59e-177