Gene HanXRQChr12g0359381


Sequence ID HanXRQChr12g0359381  add to my list
Species Helianthus annuus
Alias No gene alias
Length 561aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 561 amino acids

>HanXRQChr12g0359381_HELAN
MSKEEFVKIQTCSLKVNIHCDGCKRKVKKILQKIDGVYTINIDPEQSKVTVSGVVDPDTL
CKKLAKSGKLATVWGDSKPNPQINNQLKNMQIDGGKGGGNNKNQGQKGGGNGGGNNNNNN
NNQKGGGGGGGGGGGGGGGGGPTPQQLQQFQQLQQMKGFQDLKNHPQFKDMKLPHFGNSG
GGGGGGGGGGGGGKGAQKGVKVVEEEDDEFDDDYDDEDDDEFDDDYDDDDFDDDEIDDAP
VKKPVMMGGGGGGGGGQMGNMLPQLMKSGQIPPQFMKGGQIPPQFMKGGQMPPQQMKGGM
PPMGNDGGNGGKKGGGGGGGGGGGGGNIPVQVNGGGKKGGGGGGGGNQNQGGGQNKNGGS
PSGGGQNKNGGGGGGGGQNKGGGGGGGMMNGNGGNKGGMNDGIHGMPNMMGMNGGGGGGG
GNVGPMGNMPMGGQLGPPRMGQMNGSMGPVGNMQAVQGLPTGAAMGGGGGGGGYFPGGGA
EAMGGNPYHQQQLAAMMNQQQAVGGERFHPMMYARPPPAVNYMQPPPPYQPYPPYPYPHP
PQGEPIAQYFNDDNTSSCNIM




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP023608 Unannotated cluster
3 GP040483 Unannotated cluster
4 GP070015 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily
Armadillo-type fold
IPR016024 		Armadillo-type fold Homologous_superfamily

IPR006121 IPR036163 IPR016024
Figure 1: IPR domains for HanXRQChr12g0359381



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
DCAR_002413 orthology 0.87 2 - -
DCAR_024583 orthology 0.499 2 - -
DCAR_027154 orthology 0.471 2 - -
Dr12767 orthology 1 1 - -
HanXRQChr10g0310421 ultra-paralogy 0.167 0 - -