Gene ORGLA04G0076400.1


Sequence ID ORGLA04G0076400.1  add to my list
Species Oryza glaberrima
Alias No gene alias
Length 386aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 386 amino acids

>ORGLA04G0076400.1_ORYGL
MGEEEKKEAAKAKEEEKPKQEEKPKEQEEGKKEEKPKEEGEKGKDGGGGEEKKDGEAAAA
DAPPPLPPPPPEEVVMRVYMHCEGCARKVRKILKGFDGVEDVIADSKAHKVLVKGKKAAA
DPMKVVERVQKKTGRKVELLSPMPPPPEEKKEEEKKEEPEPPKPEEKKEPPVIAVVLKVH
MHCEACAQGIKKRILKMKGVQSAEPDLKASEVTVKGVFEEAKLAEYVHKRTGKHAAIIKS
EPVAPPEKVAAEGGDEKKAAEGGDEKKDEKEEKKDGKEEGGNGGGDEKKEEKEKEKEGGN
ADGEEKDKDKEKDPAAIAAANLYLHYPRFAFPAGYYPPGPGYAYPPPYPPSYPPPYQPSY
PPYPSHPSHHPSQIFSDENPNACSVM




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015545		 Heavy metal transport/detoxification group1
3 GP040674 Unannotated cluster
4 GP465991 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for ORGLA04G0076400.1



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
HORVU2Hr1G070140.6 orthology 0.176 4 269.2 4.5e-72
HORVU2Hr1G070160.1 orthology 0.176 4 - -
bradi_pan_p044045 orthology 0.2 3 286 4.29e-94
orysa_pan_p042238 orthology 0.0028 1 416 2.9e-144
tritu_pan_p022381 orthology 0.165 4 297 1.93e-98