Gene PGSC0003DMP400011064
| Sequence ID | PGSC0003DMP400011064 add to my list | ||
|---|---|---|---|
| Species | Solanum tuberosum | ||
| Alias | No gene alias | ||
| Length | 380aa | ||
| Gene Annotation | PGSC0003DMT400015954 Protein | ||
| Gene Ontology |
 Display term(s) (1)
|
Length: 380 amino acids
>PGSC0003DMP400011064_SOLTU MAQQMEKSRVTEIQVRMDCNGCVQKIKKALHSVHGIHDLYIDFPQQKITIVGSADPEKIV KAIKKTRKSAIVCSHIEQADPPTEPEEAEPAESEAPTPESSNPPTEAPPAEEPPHEPPKD PPTQENQPAEEKQTHEVADNAKTQSGQPSKPRDVEEVHVIYHYPPDYGYRYNFSQGMSSP EPPRDHGYRYNYGQNVIHEPPRDHRFSRYNYGQSMSQEAPRDHGYNRYNYGQSMSYEPPR DHSYRYHYGQSMIHEPPQGDSGFRNNHTRPIGPEFRPEMPPPGQPQGDSSFRNNHTRPIG PEFRPEVPPPGQPPVYATHSYNSYQPSPYVTGYEYIRSPPRYTQYTRPEHYSEDYHYGNN SNGTISSVFSDENPNACTIA
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | Heavy metal transport/detoxification group1
GP015397 |
Heavy metal transport/detoxification group1 |
| 3 | GP047778 | Unannotated cluster |
| 4 | GP077656 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
|
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for PGSC0003DMP400011064
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| Solyc01g065690.2.1 | orthology | 0.0423 | 1 | 298.1 | 8.2e-81 |
| capan_pan_p001422 | orthology | 0.0785 | 2 | 364 | 4.53e-125 |
| ipotf_pan_p022606 | orthology | 0.81 | 4 | - | - |
| ipotf_pan_p023152 | orthology | 0.79 | 4 | - | - |
| itb04g19450.t2 | orthology | 1 | 4 | - | - |
| itb13g21880.t2 | orthology | 0.827 | 3 | 134 | 2.2e-31 |