Gene PGSC0003DMP400055292


Sequence ID PGSC0003DMP400055292  add to my list
Species Solanum tuberosum
Alias No gene alias
Length 298aa
Gene Annotation PGSC0003DMT400081864 Protein



Length: 298 amino acids

>PGSC0003DMP400055292_SOLTU
MVADEIAMMNLENEDFDPETESESEDEEGDQQVVKLAEPSKTAVYNRDGLLERLADISWP
DDLDWTHRLSINREEQEEVDVNDDLAREHSFYTQGLEGIRQAYINFQSTGEPFLRPSDYY
AEMVKSDTHMEKVKGRLLAEKRRIEESEERRKARDNKKLAKDVQAQKMKERTKQKKQEIE
SVKKWRKQRQQSGFDKEDAGGLDLAFNGGNADKPYQRSNKKRPGASPGDRSGGKATFGGK
GKGKGFDKKRKSREYKDSKFGFGGRKGLKKQNTADTTNDFGGFHKGDRSAKSNKRVKR




Clustering Level Family ID Family Name
1
Unknown function duf1138 family
GP002478		 Unknown function duf1138 family
2 GP018276 Unannotated cluster
3 GP042981 Unannotated cluster
4 GP075980 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Eukaryotic rRNA processing
IPR008610 		Eukaryotic rRNA processing Family

IPR008610
Figure 1: IPR domains for PGSC0003DMP400055292



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
AT3G22660.1 orthology 0.605 5 - -
PGSC0003DMP400055391 ultra-paralogy 0.0222 0 - -
Solyc01g006090.2.1 orthology 0.0423 1 - -
brana_pan_p006433 orthology 0.587 6 - -
brana_pan_p007884 orthology 0.585 7 - -
brana_pan_p012403 orthology 0.58 6 - -
brana_pan_p034179 orthology 0.568 6 - -
braol_pan_p022657 orthology 0.566 6 - -
braol_pan_p024061 orthology 0.627 7 - -
braol_pan_p030426 orthology 0.587 6 - -
brarr_pan_p009571 orthology 0.568 6 - -
brarr_pan_p026538 orthology 0.575 5 - -
brarr_pan_p031703 orthology 0.574 6 - -
capan_pan_p017109 orthology 0.204 2 - -
ipotf_pan_p017885 orthology 0.465 4 238 1.66e-77
ipotf_pan_p024335 orthology 0.74 3 - -
ipotf_pan_p027028 orthology 0.508 3 - -
itb11g17740.t1 orthology 0.457 3 - -
itb12g07110.t1 orthology 0.462 4 219.5 3.2e-57