Gene PGSC0003DMP400055391
Sequence ID | PGSC0003DMP400055391 add to my list |
---|---|
Species | Solanum tuberosum |
Alias | No gene alias |
Length | 291aa |
Gene Annotation | PGSC0003DMT400081991 Protein |
Length: 291 amino acids
>PGSC0003DMP400055391_SOLTU MAMMNPENEDFDPETESESEDEEGDQQVVKLAEPSKTAVYNRDGLLERLADISWPDDLDW THRLSINREEQEEVDVNDDLAREHSFYTQGLEGIRQAYVNFQSTGEPFLRPSDYYAEMVK SDTHMEKVKGRLLAEKRRIEESEERRKARDNKKLAKDVQAQKMKERTKQKKQEIESVKKW RKQRQQSGFDKEDAGGLDLAFNGGNADKPYQRSNKKRPGVSPGDRSGGKTTFGGKGKGFD KKRKSREFKDSKFGFGGRKGLKKQNTADTTNDFGGFHKGDRSAKNNKRVKR
Clustering Level | Family ID | Family Name |
---|---|---|
1 | Unknown function duf1138 family
GP002478 |
Unknown function duf1138 family |
2 | GP018276 | Unannotated cluster |
3 | GP042981 | Unannotated cluster |
4 | GP075980 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
ID | Name | Type |
---|---|---|
Eukaryotic rRNA processing
IPR008610
|
Eukaryotic rRNA processing | Family |
Figure 1: IPR domains for PGSC0003DMP400055391
Homology | RBH | ||||
---|---|---|---|---|---|
Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
AT3G22660.1 | orthology | 0.589 | 5 | 221.9 | 5.3e-58 |
PGSC0003DMP400055292 | ultra-paralogy | 0.0222 | 0 | - | - |
Solyc01g006090.2.1 | orthology | 0.0264 | 1 | - | - |
brana_pan_p006433 | orthology | 0.571 | 6 | - | - |
brana_pan_p007884 | orthology | 0.569 | 7 | 286 | 1.3e-96 |
brana_pan_p012403 | orthology | 0.564 | 6 | - | - |
brana_pan_p034179 | orthology | 0.552 | 6 | - | - |
braol_pan_p022657 | orthology | 0.55 | 6 | 279 | 1.53e-93 |
braol_pan_p024061 | orthology | 0.611 | 7 | - | - |
braol_pan_p030426 | orthology | 0.571 | 6 | - | - |
brarr_pan_p009571 | orthology | 0.552 | 6 | - | - |
brarr_pan_p026538 | orthology | 0.559 | 5 | 293 | 2.71e-99 |
brarr_pan_p031703 | orthology | 0.558 | 6 | - | - |
capan_pan_p017109 | orthology | 0.188 | 2 | 288 | 5.7e-98 |
ipotf_pan_p017885 | orthology | 0.449 | 4 | - | - |
ipotf_pan_p024335 | orthology | 0.724 | 3 | - | - |
ipotf_pan_p027028 | orthology | 0.492 | 3 | - | - |
itb11g17740.t1 | orthology | 0.441 | 3 | - | - |
itb12g07110.t1 | orthology | 0.446 | 4 | - | - |