Gene Solyc01g065690.2.1


Sequence ID Solyc01g065690.2.1  add to my list
Species Solanum lycopersicum
Alias No gene alias
Length 404aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 404 amino acids

>Solyc01g065690.2.1_SOLLC
MAQQMEKPRVTEIQVRMDCNGCVQKIKKALHSVHGIHDLYIDFPQQKITIVGSADPEKIV
KAIKKTRKSAIVCSHIEQADPPTEPEEAEPAESEAPTPDSTNPPSEAPPAEEPPHEPPKD
PPTQENQPAEEKQTHEGADNAKTQSGQPSKPRDVEEVHVIYHYPPDYGYRYNYSQGMSSH
EPPRDHGYRYNYGQNVIHEPPQDHRYRRYNYGQSMSQEALRDHGYNRYNYGQSMSYEPPR
DNSCRYHYGQSMSHEPPQRDSSFRNNQARPAGPEFRHEMPPPGQLQGDSGFRINHVRPIG
PEFRPEMPPPGQPQGDSGFRNNHTRPIGPEFRPEVPPPVYATHSYNSYQPSPYVTGYEYI
RSPPRYTQYTRPEHYSEDYHYGNNSNGTISSVFSDENPNACTIA




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015397		 Heavy metal transport/detoxification group1
3 GP047778 Unannotated cluster
4 GP077656 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for Solyc01g065690.2.1



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
PGSC0003DMP400011064 orthology 0.0423 1 297.7 1.1e-80
capan_pan_p001422 orthology 0.0972 2 377 1.07e-129
ipotf_pan_p022606 orthology 0.829 4 - -
ipotf_pan_p023152 orthology 0.809 4 - -
itb04g19450.t2 orthology 1 4 - -
itb13g21880.t2 orthology 0.845 3 144.4 1.8e-34