Gene Solyc01g098760.2.1
Sequence ID | Solyc01g098760.2.1 add to my list | ||
---|---|---|---|
Species | Solanum lycopersicum | ||
Alias | No gene alias | ||
Length | 427aa | ||
Gene Ontology |
Display term(s) (1)
|
Length: 427 amino acids
>Solyc01g098760.2.1_SOLLC MNKQEMLKSQTCVLKVNIHCDGCKQKVKKKLQKIEGVYTVKIDSDQSKVTVTGNVDPATL IKKLVKSGKHAELWGGGQKGGSNFNMMNNQFMNMQMDNFKGGKDNKSQKGGGGGGNKEPP KGNAQQFLQMMQNLKGSKDNFKMPNIPNPKDQKSVKFNLPEDEFDDESDDFDDESDDYDD ESDEEFGAPPPSKMMGGGSHGLNAMMMKGGPMGNNGGNGKKGGVEIPVQMKGMAGNHHGG GKNNNNGGGKQGKGGNQNQNVGKNGGKGNNNGSFGGAAVPQKGGGGGKMDGGLMMNSLQQ GGPHGMMSMGQKSGGGPMTMGPMGHMSAAQGLPAGGPGGYPGMGQGGNNPYSQQQQQYMA QMMMNQQRPAGYDMYGAHPNMYGAHPMMYARQHPSVSYGPPPPMGAPVHDNFTHMFSDEN TGSCSIM
Clustering Level | Family ID | Family Name |
---|---|---|
1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
2 | GP023608 | Unannotated cluster |
3 | GP040483 | Unannotated cluster |
4 | GP070015 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
ID | Name | Type |
---|---|---|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for Solyc01g098760.2.1
Homology | RBH | ||||
---|---|---|---|---|---|
Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
Ca_43_818.1 | orthology | 0.614 | 5 | 133.3 | 1e-30 |
Cc00_g13310 | orthology | 0.616 | 5 | 161.8 | 8.8e-40 |
PGSC0003DMP400049789 | orthology | 0.0333 | 1 | 317.4 | 1.5e-86 |
capan_pan_p033445 | orthology | 0.155 | 2 | - | - |
ipotf_pan_p011347 | orthology | 0.515 | 4 | - | - |
itb15g11860.t2 | orthology | 0.515 | 4 | 169.5 | 5.4e-42 |