Gene Sspon.01G0009480-1A
| Sequence ID | Sspon.01G0009480-1A add to my list | ||
|---|---|---|---|
| Species | Saccharum spontaneum | ||
| Alias | No gene alias | ||
| Length | 794aa | ||
| Gene Ontology |
 Display term(s) (1)
|
Length: 794 amino acids
>Sspon.01G0009480-1A_SACSP MSTSVTAFLPSQRPESHVAEFLCSSLSRALPMASGAAAAPGVQTVVLKVAIHCHGCKKKV RRVLRSIEGACLAVTVVGTVDADTLIQKLYKSGKKGEPWQCHPPTKKTEPAPEAPPAPKP AGDGGKDAAPAAAAADKKPEEAVKPVKEPQGESSEEKKKKSEQEGGAAEKKPEAESKEAE KKKPPEQEGGAVEKKPEAESKKEEKVEAKKDGGDSKGAETKAKAAAEPAKEAAPAAAAND KDEAKKSDKPKDAGKAEPAAVTTTERSLPTPPAPAPKHAYEHEYRHPYYAPQPVVSYHAS HPSSSVSYTYLAPQAQPAYSTQQAHPHQAYSMHQPQPAYSYSTQQPQPEKQWSPSYLYMP YPHAAAPEPYYQQQDHYSPPGMHASPMHDSYRIFDDENPNSCSVIGRQVVGEAAPLPQYA LSGAGPGQAGRTNSDSYSDGEGAGEVGGEGIGYGWCTARRMPACLPRDPPGSSNSRRIAE IQGGVVVGFLGTNKAGHEAPNVSCSGQIRARSPEISWSLGGSRELIRLSVMGNQQWAVKE GRTRQPAWSPSSAVAMDEATGGLLGSPSVSEPDHAVPSPPRSKIGKDGGFTSKLEAGPGL RSENDDHSVHFLMMQDHMAGPTATRPRATPVAGDIRAHGLTSVTMAGRDWEQARGAEASF RDGESWRRPLQPQNRAACQTPGPEERAEALSQVQTWKGHAVEWRGYDLTLLGENEKLRSG GESCAPSVGHGHAVHECMQYTSDLGQRPPCDHVCTVRGVACESCDCVVPSDFCGTCHVNK QYFGEKPEKMAPFG
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | GP023608 | Unannotated cluster |
| 3 | GP040483 | Unannotated cluster |
| 4 | GP070015 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
|
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for Sspon.01G0009480-1A
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| AUR62008611-RA | orthology | 1 | 5 | - | - |
| Bv7_164120_fciq.t1 | orthology | 1 | 5 | - | - |
| Sspon.01G0009680-1A | ultra-paralogy | 0.0785 | 0 | - | - |
| Sspon.01G0009680-1P | ultra-paralogy | 0.0243 | 0 | - | - |
| Sspon.01G0009680-2D | ultra-paralogy | 0.0243 | 0 | - | - |
| Sspon.01G0009680-2P | ultra-paralogy | 0.0176 | 0 | - | - |
| evm_27.model.AmTr_v1.0_scaffold00016.303 | orthology | 1 | 3 | - | - |
| maize_pan_p022437 | orthology | 0.22 | 2 | - | - |
| maize_pan_p036961 | orthology | 0.223 | 2 | - | - |
| sorbi_pan_p003399 | orthology | 0.124 | 1 | - | - |