Gene Sspon.02G0007720-1A
Sequence ID | Sspon.02G0007720-1A add to my list |
---|---|
Species | Saccharum spontaneum |
Alias | No gene alias |
Length | 276aa |
Length: 276 amino acids
>Sspon.02G0007720-1A_SACSP MVALANEEALAHDEDIMDDADSDVEESDSEDDSGEEAQAKSSEKAIYNKEAILEKLEDIA WPENADWMHKLTIEHDQGEKVDVNDDLARELAFYTQALDGTRKAFEKLQSMKVRFLRPTD YYAEMVKTDAHMHKIKGRLLSEKKRIEEAEERRKARESMKKAKEVQAEKKKERTKQKKEQ IESVKKWRKQRQQGGFTKGNDDVPDLNFEGEEGFKQSKKKRPGVSPGDRSGGLAKRGKEG KNRRARDSKFGHGGRKGLKKQNTAETTNDFRSFNQG
Clustering Level | Family ID | Family Name |
---|---|---|
1 | Unknown function duf1138 family
GP002478 |
Unknown function duf1138 family |
2 | GP018276 | Unannotated cluster |
3 | GP042981 | Unannotated cluster |
4 | GP075980 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
ID | Name | Type |
---|---|---|
Eukaryotic rRNA processing
IPR008610
|
Eukaryotic rRNA processing | Family |
Figure 1: IPR domains for Sspon.02G0007720-1A
Homology | RBH | ||||
---|---|---|---|---|---|
Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
Sspon.02G0007720-1P | ultra-paralogy | 0.0326 | 0 | - | - |
Sspon.02G0007720-2B | ultra-paralogy | 0.034 | 0 | - | - |
Sspon.02G0007720-3C | ultra-paralogy | 0.0321 | 0 | - | - |
Sspon.02G0007720-4D | ultra-paralogy | 0.0518 | 0 | - | - |
maize_pan_p000100 | orthology | 0.0593 | 1 | - | - |