Gene Sspon.04G0011730-3C
Sequence ID | Sspon.04G0011730-3C add to my list | ||
---|---|---|---|
Species | Saccharum spontaneum | ||
Alias | No gene alias | ||
Length | 320aa | ||
Gene Ontology |
![]()
|
Length: 320 amino acids
>Sspon.04G0011730-3C_SACSP MGEEEKAKEAAAPANKAKEAEEKKDDGGGGEEKKEEAPPLLPPPPEEMVMRVFMHCEGCA RKVKKILKGFDGVEDVITDTKAHKVVVKGKKAAADPMKVVERVQKKTGRKVELLSPMPPP KEEKKEEEKKEEPEPPKPEKKEEPTMLAVVLKVHMHCEACAQVIKKRILKMKGVQSVEAD LKASQVTVKGVFEEAKLADYVYRRTGKHAAIVKSEPVAAENVDDGNAKDDKKAAEGGEDK KDDGKEEKKDGGDVGGDEKEAGKKKDDGNAGDEEKDKDPGAIANMYMHYPRFNHPSGYGY AYQYPPQLFSDENPNACSLM
Clustering Level | Family ID | Family Name |
---|---|---|
1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
2 | Heavy metal transport/detoxification group1
GP015545 |
Heavy metal transport/detoxification group1 |
3 | GP040674 | Unannotated cluster |
4 | GP465991 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
ID | Name | Type |
---|---|---|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for Sspon.04G0011730-3C
Homology | RBH | ||||
---|---|---|---|---|---|
Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
Sspon.04G0011730-1A | ultra-paralogy | 0.0113 | 0 | - | - |
Sspon.04G0011730-2B | ultra-paralogy | 0.009 | 0 | - | - |
maize_pan_p017565 | orthology | 0.0801 | 2 | 395 | 5.98e-139 |
sorbi_pan_p002454 | orthology | 0.0506 | 1 | 400 | 9.35e-141 |