Gene Sspon.05G0013620-1A


Sequence ID Sspon.05G0013620-1A  add to my list
Species Saccharum spontaneum
Alias No gene alias
Length 155aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 155 amino acids

>Sspon.05G0013620-1A_SACSP
MGIVDVVSEYCSLPRSRRHLKKRKQFQTVEMKVRIDCEGCERKVKKALEDMKGVSSVEVT
AKQNKVTVTGYVDAAKVMRRVAYKTGKRVEPWPYVPYEMVAHPYAPGAYDKKAPAGYVRN
VVADPTAAPLARASSTEARYTAAFSDENPNACSVM





Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323
Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015397
Heavy metal transport/detoxification group1
3 GP040065 Unannotated cluster
4 GP463617 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121
Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163
Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for Sspon.05G0013620-1A



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Mba04_g22800.1 orthology 0.386 3 - -
Mba04_g33020.1 orthology 0.426 3 - -
musac_pan_p005239 orthology 0.426 3 - -
musac_pan_p034720 orthology 0.427 3 - -
sorbi_pan_p013767 orthology 0.0261 1 - -