Gene brana_pan_p007791


Sequence ID brana_pan_p007791  add to my list
Species Brassica napus
Alias No gene alias
Pangenome status Dispensable (2/3)
Length 170aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 170 amino acids

>brana_pan_p007791_BRANA
FSYNCPQDVIRETVLKVHIHCAKCDQDLQNKLLKHKAIHIVKTDTKAQTLTVQGTIESAK
LLTYIRKKVHKHAEIVSSKTEEEKKKEEEEKKKKKEEEEKKKKEEEEKKKKAEVKVEVTK
TTTQIVEFKEKEKVKVEAQKDKDGNIPYFVHYVYAPQLFSDENPNACCIV


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015545		 Heavy metal transport/detoxification group1
3 GP342504 Unannotated cluster
4 GP464372 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for brana_pan_p007791



Represented sequence(s):
BRANA_Darmor_v8.1
BnaU01g22950.1D2
BRANA_v5.0
GSBRNA2T00098190001
Unrepresented genome(s):
BRANA_Tapidor_v6.3
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
AT1G29000.1 orthology 0.136 2 - -
braol_pan_p000010 orthology 0.0431 1 - -