Gene brana_pan_p011549
| Sequence ID | brana_pan_p011549 add to my list | ||
|---|---|---|---|
| Species | Brassica napus | ||
| Alias | No gene alias | ||
| Pangenome status | Dispensable (2/3) | ||
| Length | 563aa | ||
| Gene Ontology |
 Display term(s) (1)
|
Length: 563 amino acids
>brana_pan_p011549_BRANA MNKQDAMKLQTCVLKVNVHCEGCKHKVKKQLQKIEGVYSVKADVEQGKVTVTGNVDPALL VKKLSKSGKHAEIIGGGGGGGGGKGFPNLNGQFGNLSMSGNGKGKGGKESNQVKGKGNGG GGGGQNQGHGGQPMQLTPQQIQQMMMMRAAQGGGGGGKDMKMMMPPVASKDQKKSVKFAE EDDEFSDDYDDEFSEDDYDDDEFDDEDGEMGGHGHGAGGGNHHMPPNKTMMMPNKMPQMG QHGGGPKGPNEIMMMMNGFKPGGGGGGGGAGKKGGGGGGGFEIPVQMKGMGEGKKGGEKG KKEGKDKKGGGGKTGKTDAKSGGGILGFFKNVKSGKGDEKKGGGKKEGGGGGDKVKSSGG GVHHYDSGPKKGGSKSKGGAHGAHDIDDLIKHNKAGGGGNKGNHSAKGMMGGPMGQGGPM GMMGQGGPMGQGGPMSMMGQGGGPMGMMGQGGPMGHQGGSYPAVQGLPMSGGGYYPPPPQ ANHQMNQQQYMQMMMHQQQQQQQAAAAHGGYGGGHGGDMYHQMMYARPYPAVNYAHPPPM PPPHSGPYSDMFSDENPAGCSIM
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | GP023608 | Unannotated cluster |
| 3 | GP040483 | Unannotated cluster |
| 4 | GP070015 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
|
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for brana_pan_p011549
Represented sequence(s):
Unrepresented genome(s):
BRANA_Darmor_v8.1
BRANA_v5.0
BRANA_Tapidor_v6.3
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| braol_pan_p031579 | orthology | 0.0078 | 1 | 543 | 2.39e-189 |