Gene brana_pan_p018519


Sequence ID brana_pan_p018519  add to my list
Species Brassica napus
Alias No gene alias
Pangenome status Specific (1/3)
Length 165aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 165 amino acids

>brana_pan_p018519_BRANA
MLIGTLGKRAEVLTMTKKSDVVPEKNGQSNIVPKKEANPEIKQTDVKPERSIREVEYNLR
PASQELEVYIRKVISKFEGVENCVVDIQNKRIVVTGDFDQKKLFEELQKKRRKIIKKDHE
LIEKYRRIHARVRSGDEKEMAKFDMSNEENPNGALNHHKKLGMVI




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP246754 Unannotated cluster
3 GP351161 Unannotated cluster
4 GP480573 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for brana_pan_p018519



Represented sequence(s):
BRANA_v5.0
GSBRNA2T00037066001
GSBRNA2T00155919001
Unrepresented genome(s):
BRANA_Darmor_v8.1
BRANA_Tapidor_v6.3
Download sequences FASTA

  1. 2.
1. GSBRNA2T00037066001 0.00 4.06
2. GSBRNA2T00155919001 4.06 0.00


Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
braol_pan_p019160 orthology 0.0879 2 261 2.21e-90
brarr_pan_p037797 orthology 0 1 315 7.32e-112