Gene brana_pan_p029052


Sequence ID brana_pan_p029052  add to my list
Species Brassica napus
Alias No gene alias
Pangenome status Core (3/3)
Length 605aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 605 amino acids

>brana_pan_p029052_BRANA
MNKQDVMKLQTCVLKVNVHCEGCKHKVRKQLQKIEGVYSVKADVEQGKVTVTGNVDPAIL
VKKLSKSGKHAEIIGGGGGGGGGGGGGGKGFPNLNGQFGNLSMNGKGGKESKGKPNGGGG
GGGGQPMQLTPQQIQQMMMMKAAQAQGGGGGGGGQPMQLTPQQMQQMMMMKAAQAQGGGG
GGGGGKDMKMMMPPMASKDQKKSVKFAEEEDDEFSDDDYDDEFSEDDYDDDEFDDEDEDD
DMGGGHGHGHGGGGGGNHHMPPNKMMMMPNKMGGGGGAKGPNEMMMMMNGFKAGGGGGGG
EGKKGGGGFEIPVQMKGMSEGKVGKEGKKGGGEKGDKEGKKSKGGGGKNGKTDAKSGGGG
GGLLGFFKNGKSGKGDEKKGGGGKKEGGGGGDKVKSSGGGGGGVHHYDSGPKKGGGGGSK
GGGHGSHDIDELMKHHKAGGGGGGNKGNHSAKGMGGPMGQGGPMGMMGQGGPMGMMGQGG
QMGMMGHQGGQMGPMGHQGGSYPAVQGLPMSGGGGYYQPPPQASHQMNQQQYMQMMMHQQ
QQQQQQAAAHGGYGGGHGGDMYHPMMYARPYPSVNYAHPPPMPPPHSDSYTHMFSDENPG
SCSIM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP023608 Unannotated cluster
3 GP040483 Unannotated cluster
4 GP070015 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for brana_pan_p029052



Represented sequence(s):
BRANA_Tapidor_v6.3
BnaA05g27950.1T
BRANA_Darmor_v8.1
BnaA05g36650.1D2
BRANA_v5.0
GSBRNA2T00038591001
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
AT3G05220.1 orthology 0.126 2 - -
brarr_pan_p030988 orthology 0.0115 1 473 8.14e-161