Gene brana_pan_p034390
| Sequence ID | brana_pan_p034390 add to my list | ||
|---|---|---|---|
| Species | Brassica napus | ||
| Alias | No gene alias | ||
| Pangenome status | Specific (1/3) | ||
| Length | 182aa | ||
| Gene Ontology |
 Display term(s) (1)
|
Length: 182 amino acids
>brana_pan_p034390_BRANA MSTFIAKSLGSIVSIVARFFSFRRRPKSNTRPTTHISYFRMSKKRPLSLQTVDLKVRMCC TGCVRIVRKAISKLRGVDSVEVEREMGRVRVVGYVDRNKVLKAVRRAGKRAEFWPYPEPP LYFTSTQNYFVDPSKEFKESYNYYRHGYNGTEQHGNIPVGSRGDDRVSNMFNDDNVNACS VM
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | Heavy metal transport/detoxification group1
GP015397 |
Heavy metal transport/detoxification group1 |
| 3 | GP040065 | Unannotated cluster |
| 4 | GP078604 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
|
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for brana_pan_p034390
Represented sequence(s):
Unrepresented genome(s):
BRANA_v5.0
BRANA_Darmor_v8.1
BRANA_Tapidor_v6.3
| 1. | 2. | |
|---|---|---|
| 1. GSBRNA2T00107979001 | 0.00 | -0.00 |
| 2. GSBRNA2T00145621001 | -0.00 | 0.00 |
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| AT4G10465.1 | orthology | 0.103 | 3 | 324 | 3.79e-115 |
| braol_pan_p039816 | orthology | 0 | 1 | 365 | 2.22e-131 |
| brarr_pan_p039064 | orthology | 0.0054 | 2 | 364 | 8.04e-131 |