Gene brana_pan_p065969


Sequence ID brana_pan_p065969  add to my list
Species Brassica napus
Alias No gene alias
Pangenome status Specific (1/3)
Length 377aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 377 amino acids

>brana_pan_p065969_BRANA
MGEEEKKPEAAEEKKMEEKKPEEEKKEGEEKKVEADEKKGEESEKKTQEGEPTKESKDES
PPAAPEAPAPPPPPQEIVLKVYMHCEGCARKVRRCLKGFEGPYKGVEDVMTDCKSGKVVV
KGEKADPLKVLARVQRKTHRQVVLLSPIPPPSQPPEKKAEEEKPKVEEKKVEPPVVVTVV
LKVHMHCEACATEIKKRIMRMKGVESAESDLKGSQVTVKGVFEPQKLVDYVYKRTGKHAA
IMKVDPPPPPPPEVAAAAAEGEKKEEAKGEEKDGGESKGEEGKEEKATTDEEKKEGDGGK
GEGEAAEKGGGGETGGGGEEEEAKVVEVRKIENPYYYYLYQPPRVAVPPMEMPSYAYPHA
YPPQLFSDENPNACSIM




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015545		 Heavy metal transport/detoxification group1
3 GP040674 Unannotated cluster
4 GP070448 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for brana_pan_p065969



Represented sequence(s):
BRANA_Tapidor_v6.3
BnaA06g03350.1T
Unrepresented genome(s):
BRANA_Darmor_v8.1
BRANA_v5.0


Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
AT5G63530.1 orthology 0.0983 3 - -
braol_pan_p013733 orthology 0.0035 2 401 3.27e-139
brarr_pan_p006697 orthology 0.0113 1 338 2.86e-115