Gene braol_pan_p007803


Sequence ID braol_pan_p007803  add to my list
Species Brassica oleracea
Alias No gene alias
Pangenome status Core (3/3)
Length 562aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 562 amino acids

>braol_pan_p007803_BRAOL
MSKEEFMKIQTCVLKVNIHCDGCKQKVKKILQKIEGVFTTKIDAEQGKVTVSGNVDPSVL
IKKLLKSGKHAEIWGAPKANNTNQNQPNLANQLKGMQIDHGGKGGGGGGGGNNNKGQKGG
GGGGGGGGGGGGGGGGPPPPKMILPQLTPQQMQQLNPQQLQQLQQLQQMKAFQDLKLPPP
QLKGPGPGSVPMNKNPQNPNQNAVKFDVPEDDDDDFSDDDEFDDDDEFDDELDDDEFDDR
PPPNKMKPMMGGGGGNMMMPNNMMPNMMMMPNAQKNGGGGPGPAGGKIVGKGGPGGVPFP
VQMPGGGGGNGGMKGGPPGGGGGNVGNPNQGGGKNSGKNGGGGGHPLDVKNGGGGGGPSG
NNKGGGQMIGGPNGGKKGGAGGGGGPMGGGLPPGFRPMGGGNGGPPTMNMPMGGPMGSLP
SMGGGPGPMGNNMQAVQGLPAMGPGGGGGGSAAGVPPGYFQGHGGAGGGQDSMPGNPYLQ
QQQQQQQQQYLTAVMNQQRAMGNERFQPMMYARPPPDVNYLPPQPHQQHPYSYPYPYPYP
PHGGDQYSNYFNDENTSSCNIM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP023608 Unannotated cluster
3 GP040483 Unannotated cluster
4 GP070015 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for braol_pan_p007803



Represented sequence(s):
BRAOL_TO1000
NC_027756.1_cds_XP_013612188.1_52692
BRAOL_HDEM
BolC9p58600H
BRAOL_A2_v1.0
Bol014693
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
AT5G19090.1 orthology 0.109 2 - -
MELO3C021404.2.1 orthology 0.552 4 - -
brana_pan_p042083 orthology 0.0192 1 - -
cucsa_pan_p012169 orthology 0.52 4 - -