Gene braol_pan_p009639


Sequence ID braol_pan_p009639  add to my list
Species Brassica oleracea
Alias No gene alias
Pangenome status Specific (1/3)
Length 127aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 127 amino acids

>braol_pan_p009639_BRAOL
MSQTVVLKVGMSCQGCGGAVNRVLGKMDGVESFDIDIKEQKVTVKGNVEPEAVFQTVSKT
GKKTSYWPVEAEAEPKAEAEAKAEAVTETKTEAETKTEAETKIETKVDAKADVEQKLAEA
ETKPSQV




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP239638 Unannotated cluster
3 GP341755 Unannotated cluster
4 GP463817 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for braol_pan_p009639



Represented sequence(s):
BRAOL_TO1000
NC_027753.1_cds_XP_013590141.1_33382
NC_027753.1_cds_XP_013590142.1_33381
Unrepresented genome(s):
BRAOL_A2_v1.0
BRAOL_HDEM
Download sequences FASTA

  1. 2.
1. NC_027753.1_cds_XP_013590141.1_33382 0.00 -0.00
2. NC_027753.1_cds_XP_013590142.1_33381 -0.00 0.00


Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
braol_pan_p045450 ultra-paralogy 0.0276 0 - -