Gene braol_pan_p022657


Sequence ID braol_pan_p022657  add to my list
Species Brassica oleracea
Alias No gene alias
Pangenome status Core (3/3)
Length 301aa



Length: 301 amino acids

>braol_pan_p022657_BRAOL
MSLEDDYVEDDEMNMIDEDEAASDSEAESLSDSDSDNEITEKLAEPTKTAVYNRDGLLDK
LQDISWPEDVDWTHKLTVEVDQGPQAVDVNDDLAREMAFYTQALEGTRQSFSKLQEMGLP
FLRPADYYAEMVKSDTHMEKVKSKLLYEKKQMEEAEERRKARDNKKMAKEVQSQKMKERA
KQKKDEIESVKKWRKQRQQSGFSEKGGGVGELDLEFGNGKSFQRGGGGAKKRPGVSPGDR
SGGKGKAASRMGNKKREFRDSKFGHGGRKGLSKQNTAETTNDFKGGFRGGKAGGGNKRQK
R


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Unknown function duf1138 family
GP002478		 Unknown function duf1138 family
2 GP018276 Unannotated cluster
3 GP042981 Unannotated cluster
4 GP075980 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Eukaryotic rRNA processing
IPR008610 		Eukaryotic rRNA processing Family

IPR008610
Figure 1: IPR domains for braol_pan_p022657



Represented sequence(s):
BRAOL_TO1000
NC_027750.1_cds_XP_013623268.1_15995
BRAOL_HDEM
BolC3p17533H
BRAOL_A2_v1.0
Bol026545
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
AT3G22660.1 orthology 0.122 2 410 1.1e-145
PGSC0003DMP400055292 orthology 0.566 6 - -
PGSC0003DMP400055391 orthology 0.55 6 278 1.92e-93
Solyc01g006090.2.1 orthology 0.563 6 283 1.53e-95
Solyc01g006170.2.1 orthology 0.548 5 - -
brana_pan_p034179 orthology 0.0034 1 496 3.5e-179
capan_pan_p017109 orthology 0.645 5 - -
ipotf_pan_p017885 orthology 0.551 5 - -
ipotf_pan_p024335 orthology 0.826 4 - -
ipotf_pan_p027028 orthology 0.594 4 - -
itb11g17740.t1 orthology 0.544 4 - -
itb12g07110.t1 orthology 0.549 5 - -