Gene braol_pan_p027537


Sequence ID braol_pan_p027537  add to my list
Species Brassica oleracea
Alias No gene alias
Pangenome status Core (3/3)
Length 153aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 153 amino acids

>braol_pan_p027537_BRAOL
MGVLDHVSEYFDCSSGDSKRHRSLQTVDVRVLIDCEGCERKVRRALEGMNGVRDVAIEPN
AQKVTVVGYVEPNKVVARIIHRTGKRAELYPYVPYDVVAHPYASGVYDNRAPVGYVRNTE
YDPHVSRLARASSTEVRYTTAFSDENASGCVVM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015397		 Heavy metal transport/detoxification group1
3 GP040065 Unannotated cluster
4 GP463617 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for braol_pan_p027537



Represented sequence(s):
BRAOL_TO1000
NC_027748.1_cds_XP_013585364.1_419
BRAOL_A2_v1.0
Bol013713
BRAOL_HDEM
BolC1p00372H
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
AT4G35060.1 orthology 0.0722 2 298 4.75e-106
brana_pan_p049412 orthology 0.0198 2 308 1.01e-109
brarr_pan_p033753 orthology 0.0198 2 308 8.14e-110