Gene braol_pan_p030426


Sequence ID braol_pan_p030426  add to my list
Species Brassica oleracea
Alias No gene alias
Pangenome status Core (3/3)
Length 294aa



Length: 294 amino acids

>braol_pan_p030426_BRAOL
MSFEDDFVEDDEMNMIDEDVASDSEAESLSDSDSENAITEKLPEPTKTAVYNRDGLLDKL
QDISWPEDADWTHKLTVEIEQGQAVDVNDDLAREMAFYTQALEGTRQAFEKLQEMGLPFL
RPADYYAEMVKSDTHMEKVKSKLLYEKKQMEESEERRKARDNKKMAKEVQSQKMKERAKQ
KKDEIESVKKWRKQRQQSGFSEKGAGELDLEFGNGKSFQRGGGKKRPGVSPGDRSGGKGK
PTSRMNNKKREFRDSKFGHGGRKGLSKQNTAETTNDFKGGFRGGKAGGNKRQKR


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Unknown function duf1138 family
GP002478		 Unknown function duf1138 family
2 GP018276 Unannotated cluster
3 GP042981 Unannotated cluster
4 GP075980 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Eukaryotic rRNA processing
IPR008610 		Eukaryotic rRNA processing Family

IPR008610
Figure 1: IPR domains for braol_pan_p030426



Represented sequence(s):
BRAOL_HDEM
BolC5p32786H
BRAOL_TO1000
NC_027752.1_cds_XP_013586211.1_29279
BRAOL_A2_v1.0
Bol011989
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
AT3G22660.1 orthology 0.143 2 - -
PGSC0003DMP400055292 orthology 0.587 6 - -
PGSC0003DMP400055391 orthology 0.571 6 - -
Solyc01g006090.2.1 orthology 0.585 6 - -
Solyc01g006170.2.1 orthology 0.569 5 - -
brana_pan_p006433 orthology 0.001 1 451 1.53e-161
capan_pan_p017109 orthology 0.666 5 - -
ipotf_pan_p017885 orthology 0.572 5 228 5.8e-74
ipotf_pan_p024335 orthology 0.847 4 - -
ipotf_pan_p027028 orthology 0.616 4 - -
itb11g17740.t1 orthology 0.565 4 - -
itb12g07110.t1 orthology 0.57 5 228 6.27e-74