Gene braol_pan_p030499


Sequence ID braol_pan_p030499  add to my list
Species Brassica oleracea
Alias No gene alias
Pangenome status Core (3/3)
Length 150aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 150 amino acids

>braol_pan_p030499_BRAOL
MGALDSLSEYISDYFHVSRKRRKRKVKQTVNIKVKMDCDGCERRVKNAVSSMKGVETVEL
NRKIHKVTVSGYVEPKKVLKRVERTGKKAEMWPYVPYNVVAYPYAVGVYDKKAPAGYVRK
SEQSQPLPGAPDDVIMSLFSDENPNACTVM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015397		 Heavy metal transport/detoxification group1
3 GP040065 Unannotated cluster
4 GP463678 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for braol_pan_p030499



Represented sequence(s):
BRAOL_TO1000
NC_027753.1_cds_XP_013590558.1_35323
BRAOL_HDEM
BolC6p39574H
BRAOL_A2_v1.0
Bol016160
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
AT1G71050.1 orthology 0.127 2 265 5.28e-93
brana_pan_p002075 orthology 0 1 299 3.68e-106
brarr_pan_p031034 orthology 0 1 299 2.97e-106