Gene braol_pan_p039816


Sequence ID braol_pan_p039816  add to my list
Species Brassica oleracea
Alias No gene alias
Pangenome status Core (3/3)
Length 182aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 182 amino acids

>braol_pan_p039816_BRAOL
MSTFIAKSLGSIVSIVARFFSFRRRPKSNTRPTTHISYFRMSKKRPLSLQTVDLKVRMCC
TGCVRIVRKAISKLRGVDSVEVEREMGRVRVVGYVDRNKVLKAVRRAGKRAEFWPYPEPP
LYFTSTQNYFVDPSKEFKESYNYYRHGYNGTEQHGNIPVGSRGDDRVSNMFNDDNVNACS
VM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015397		 Heavy metal transport/detoxification group1
3 GP040065 Unannotated cluster
4 GP078604 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for braol_pan_p039816



Represented sequence(s):
BRAOL_A2_v1.0
Bol007728
BRAOL_TO1000
NC_027756.1_cds_XP_013610725.1_51046
BRAOL_HDEM
BolC9p56477H
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
AT4G10465.1 orthology 0.103 3 324 3.79e-115
brana_pan_p034390 orthology 0 1 365 2.44e-131
brarr_pan_p039064 orthology 0.0054 2 364 8.04e-131