Gene brarr_pan_p000291
| Sequence ID | brarr_pan_p000291 add to my list |
|---|---|
| Species | Brassica rapa subsp. rapa |
| Alias | No gene alias |
| Pangenome status | Core (2/2) |
| Length | 459aa |
Length: 459 amino acids
>brarr_pan_p000291_BRARR MSGNNVSSRVMDILSGIVPLMKLISLTVIGLLLAHPKTQLVPRATFRLLSKLVFALFLPC LIFTELGESITLDNIVRWWFIPVNVLLSTIIGSFIGYLVVLVCRPPPEFTRVTIVMTAFG NTGNLLLAIVSSVCHSKNNPFGSGCHSRGVSYVSFAQWVAVILVYTVVYHMMEPPLEYYE VVEDEGGVENLEIEEIAVANSNDVSRPLLVEAEWPGIEEKETEHCKTPFIARVFNSISSY SQTSFPEVVDLMGETGGGESSSPRSLQCLAEPRVIRRMRVVAEQTPVKHILQPPTIASLL AIVVGSVPQLKSIVFGYEAPLSFITDSLNIMASAMVPSVMLVLGGMLSEGPRESTLGLRT TVGITVARLLVLPLVGIGIVMSADKLGLISPDPMFKFVLLLQYSTPSAILLGAIASLRGY AVREASALLFWQHVFALLSLTFYIIVFFKLTVDNVQDVP
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Auxin efflux carrier family
GP000355 |
Auxin efflux carrier family |
| 2 | GP015273 | Unannotated cluster |
| 3 | GP040583 | Unannotated cluster |
| 4 | GP132388 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Membrane transport protein
IPR004776
|
Membrane transport protein | Family |
Figure 1: IPR domains for brarr_pan_p000291
Represented sequence(s):
BRARR_Z1
BRARR_v3.0