Gene capan_pan_p000797


Sequence ID capan_pan_p000797  add to my list
Species Capsicum annuum
Alias No gene alias
Pangenome status Core (3/3)
Length 138aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 138 amino acids

>capan_pan_p000797_CAPAN
MRVHMDCQGCESKVRKALKKLHGVDNIDIDMNMQKVTVTGWADQKKVLKTVRKTGKRAEL
WPYPYNPEYHNYMNHYYYDTFYSRPGTYFAPPSSYNYRVHGYNGHAHSSYAELPYNAIFD
EQTRHMFSDDNVTGCSIM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015397		 Heavy metal transport/detoxification group1
3 GP040065 Unannotated cluster
4 GP078604 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for capan_pan_p000797



Represented sequence(s):
CAPAN_CM334_v2.0
CA.PGAv.1.6.scaffold370.70
CAPAN_Zunla_1_v2.0
Capana02g001777
CAPAN_Glabriusculum_Chiltepin_v2.0
Capang02g001583
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Ca_23_1086.1 orthology 0.438 2 - -
Ca_24_186.3 orthology 0.449 3 186 3.69e-61
Ca_42_221.2 orthology 0.449 4 - -
Ca_66_295.2 orthology 0.449 4 - -
Cc02_g14880 orthology 0.427 3 162 9.15e-53
Oeu043106.1 orthology 0.546 3 187 6.33e-62
PGSC0003DMP400018109 orthology 0.0723 2 169 1.08e-55
Solyc02g076880.2.1 orthology 0.0949 2 276 2.01e-97
ipotf_pan_p011098 orthology 0.475 5 - -
itb10g02670.t1 orthology 0.449 5 186 5.71e-62