Gene capan_pan_p010270


Sequence ID capan_pan_p010270  add to my list
Species Capsicum annuum
Alias No gene alias
Pangenome status Core (3/3)
Length 244aa



Length: 244 amino acids

>capan_pan_p010270_CAPAN
MKSIDLFCASPASTAICSSMDQRTMVRHGIRHQIDRKIDRLGDPRTPKIKTPIPCSSHQL
PFDPKNYYHQKIQKSQDGKLRRKSSADVADLGGSSRYLLSDSTTPFIDFLSSSDNCISGD
AKALVPSKPVRAKSTNERLMYRSSSTRSVESPVYKPSSTYSNDLCVYKSTRSCPREQVVE
LRVSIHCKGVKSFNIDLASKKVTVIGDVTPLGVLTSISKVKSAQFWPSPTTSSSSSSSSF
SSMV



Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323
Heavy metal transport/detoxification protein superfamily
2 GP015837 Unannotated cluster
3 GP040905 Unannotated cluster
4 GP070656 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


No IPR domain.




Represented sequence(s):
CAPAN_Zunla_1_v2.0
CAPAN_CM334_v2.0
CAPAN_Glabriusculum_Chiltepin_v2.0



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Ca_4_477.7 orthology 0.497 4 - -
Ca_84_91.1 orthology 0.488 5 181 2.77e-55
Cc01_g12180 orthology 0.486 5 181 6.63e-56
Oeu040283.1 orthology 0.439 2 - -
Oeu058521.1 orthology 0.373 2 201 7.14e-64
PGSC0003DMP400027269 orthology 0.085 2 373 2.38e-132
Solyc11g073020.1.1 orthology 0.0811 2 363 2.85e-128
ipotf_pan_p019321 orthology 0.774 5 - -
ipotf_pan_p020149 orthology 0.653 5 199 1.23e-63
itb07g12040.t1 orthology 0.759 5 - -
itb14g16600.t1 orthology 0.638 5 198 2.58e-63