Gene capan_pan_p011173
| Sequence ID | capan_pan_p011173 add to my list |
|---|---|
| Species | Capsicum annuum |
| Alias | No gene alias |
| Pangenome status | Core (3/3) |
| Length | 444aa |
Length: 444 amino acids
>capan_pan_p011173_CAPAN MVGNTKSPEQGLISTVLPLLKLLSLAIFGLILGHKKTQIVPKETFKLLSKLVFALFLPCL IFIHLGQSITLDNFVHWWFIPVNVLLSTLVGFVLGVLVVIICRPPQEFTRFTIIMTAFGN TGNLHLAIVGSICHSIDQPFGPDCKRNGVAYVSFAQWVAVILVYTLVYHMMEPPMEYYEV ADEREKVEEERGQQEDNGVSRPLLVEAEWPGIEDKETENSKTALVARIFNSVSNLSVANG PDVENDIHDTADDPEPIRCLAAPKVIKKMRTVAEQTPVQHILQPPTIASLFAILVGMVPH LKAFTFGYDAPLSFITDSLEILAGAMVPSVMLILGGMLAEGPNESKLGLRTMIGISVARL FVLPLLGIGVVTLANKMNILVEGDHMYTFVLLLQYTTPSAILLGAIASLRGYAVSEASAL IFWQHLLALISLSLYIVVYFKMFS
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Auxin efflux carrier family
GP000355 |
Auxin efflux carrier family |
| 2 | GP015273 | Unannotated cluster |
| 3 | GP040583 | Unannotated cluster |
| 4 | GP132388 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
MFS transporter superfamily
IPR036259
|
MFS transporter superfamily | Homologous_superfamily |
|
Membrane transport protein
IPR004776
|
Membrane transport protein | Family |
Figure 1: IPR domains for capan_pan_p011173
Represented sequence(s):
CAPAN_Zunla_1_v2.0
CAPAN_Glabriusculum_Chiltepin_v2.0
CAPAN_CM334_v2.0