Gene capan_pan_p026596


Sequence ID capan_pan_p026596  add to my list
Species Capsicum annuum
Alias No gene alias
Pangenome status Dispensable (2/3)
Length 159aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 159 amino acids

>capan_pan_p026596_CAPAN
MGFLDPLFELFEFHRGTSRRKLSKVRRNQLETVEIRVKMDCEGCKRRVRKSVEGMKGVTK
VEVEPKKHRLIVTGYVDPDKVLRRVRHRTGKRAEFWPYVPYDLVDHPYVRGVYDKKAPAG
YVRNVYDNPQAPSLARASSTEVNYITAFSDENPQACTIM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015397		 Heavy metal transport/detoxification group1
3 GP040065 Unannotated cluster
4 GP463678 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for capan_pan_p026596



Represented sequence(s):
CAPAN_CM334_v2.0
CA.PGAv.1.6.scaffold1274.35
CAPAN_Zunla_1_v2.0
Capana02g002550
Unrepresented genome(s):
CAPAN_Glabriusculum_Chiltepin_v2.0
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Ca_84_43.1 orthology 0.512 4 - -
Cc07_g11100 orthology 0.466 4 234 1.46e-80
HanXRQChr09g0256841 orthology 0.439 4 226 7.92e-77
PGSC0003DMP400006528 orthology 0.0936 1 298 1.68e-105
Solyc02g083550.1.1 orthology 0.117 2 290 1.32e-102