Gene capan_pan_p035442
| Sequence ID | capan_pan_p035442 add to my list | ||
|---|---|---|---|
| Species | Capsicum annuum | ||
| Alias | No gene alias | ||
| Pangenome status | Specific (1/3) | ||
| Length | 297aa | ||
| Gene Ontology |
 Display term(s) (1)
|
Length: 297 amino acids
>capan_pan_p035442_CAPAN MVNFSQEEKKSEEAKKDDPPKDEKTSVGEEKKEEKKNLXTPPPPEIVLRVFMHCEGCARK VRKSLKGFQGVEDVLTDCKTHKVVVKGEKADPLKVLERIQKKSHRQVKVTLANGFLCLFV QPQVITVVLKVHMHCEACAQEIKKRVENAEPDLKNSQVTVKGAFEATKLVEYVSKRTGKQ AVIVKVEPEKKAEEEREPKEDKKAEKKTDEKEAKKAEEGDKKEEKKEEAAPPAAAKEETV QNDADPKLDVKKNEFYYYHHPQNHQLYNPQRFAHEMHEYPPPPQIFSDENPNACSVM
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | Heavy metal transport/detoxification group1
GP015545 |
Heavy metal transport/detoxification group1 |
| 3 | GP040674 | Unannotated cluster |
| 4 | GP070448 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
|
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for capan_pan_p035442
Represented sequence(s):
Unrepresented genome(s):
CAPAN_CM334_v2.0
CAPAN_Glabriusculum_Chiltepin_v2.0
CAPAN_Zunla_1_v2.0
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| PGSC0003DMP400046761 | orthology | 0.143 | 2 | - | - |
| Solyc06g072700.2.1 | orthology | 0.13 | 2 | - | - |
| capan_pan_p009765 | ultra-paralogy | 0.0324 | 0 | - | - |
| ipotf_pan_p012033 | orthology | 0.498 | 3 | - | - |
| ipotf_pan_p015819 | orthology | 0.51 | 3 | - | - |
| itb02g17790.t1 | orthology | 0.486 | 3 | - | - |
| itb11g13550.t1 | orthology | 0.53 | 3 | - | - |