Gene capan_pan_p038035


Sequence ID capan_pan_p038035  add to my list
Species Capsicum annuum
Alias No gene alias
Pangenome status Specific (1/3)
Length 241aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 241 amino acids

>capan_pan_p038035_CAPAN
MAYSLVYPNKFALKLKIHSKICEKELKNMLLKIQDVHSVKIDEKLGNLVISGTVDPATII
TMLEKLGRKPELLWVQGIPINGNQVHKASRVHAGFDEGNDSKHVRIMTQLEQLSRIPGLQ
TIELTETIKLSFQGESRNELPGDDKILEISTSKNVNGGGFCRASPSCCGDHADINRRSHS
HCGCCRDSGDTSSQHAIPSAPPLPFEYFQAPPSPQSSSSPSMPITYHSFLSDENVNGCII
A




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP243330 Unannotated cluster
3 GP349835 Unannotated cluster
4 GP483038 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for capan_pan_p038035



Represented sequence(s):
CAPAN_CM334_v2.0
CA.PGAv.1.6.scaffold1013.22
Unrepresented genome(s):
CAPAN_Glabriusculum_Chiltepin_v2.0
CAPAN_Zunla_1_v2.0


Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Ca_25_98.1 orthology 0.995 4 - -
Ca_63_138.6 orthology 0.995 4 - -
Ca_78_564.2 orthology 1 4 - -
Cc02_g07920 orthology 1 4 - -
PGSC0003DMP400024192 orthology 0.303 1 - -
capan_pan_p030739 ultra-paralogy 0.0805 0 - -
capan_pan_p041830 ultra-paralogy 0.145 0 - -
ipotf_pan_p023915 orthology 0.834 3 - -
ipotf_pan_p024814 orthology 0.825 2 155 1.19e-46
itb02g05420.t1 orthology 0.848 3 151 3.5e-45