Gene cicar_pan_p017617
Sequence ID | cicar_pan_p017617 add to my list | ||
---|---|---|---|
Species | Cicer arietinum | ||
Alias | No gene alias | ||
Pangenome status | Core (2/2) | ||
Length | 384aa | ||
Gene Ontology |
Display term(s) (1)
|
Length: 384 amino acids
>cicar_pan_p017617_CICAR MAATQTQTEPTQLEQHLNYKTTVLKVSIHCEGCKRKVHKILQAIHGVHNINIDLRQQKVV VTGNVNSDILIKKLIKTGKHVELWPEPTDSKKNKPGKSENKEKQNNDTETESSEEINQSS ENDNETGKVKLIVDTSHTSKTVKSTNGSGEVHVINGNKLSEGCATGKTGEVHVQEVKPEV RRQTVVLPAGPVTQKKVSVAVQFPNDDNEESSANEKTVGGGKKKKKKGKGKVNNNNANEG AVEQCGDDPGTGGSGNRSHGQGHGNLNFHGMVHPGSVPVSSPANENPPRHYTNNQLYPPH YYAPPPAVAPVCTVSYHTAYPSSSSYGAAYYAPPQAYQYAHVMNSGTEMEPRPYTYESES YTSSQASDEFVYFSDENPNACSVM
Multiple alignment used to build consensus sequence:
Clustering Level | Family ID | Family Name |
---|---|---|
1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
2 | GP023608 | Unannotated cluster |
3 | GP040483 | Unannotated cluster |
4 | GP070015 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
ID | Name | Type |
---|---|---|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for cicar_pan_p017617
Represented sequence(s):
CICAR_CDC_Frontier_kabuli
CICAR_ICC_4958_desi
Homology | RBH | ||||
---|---|---|---|---|---|
Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
maize_pan_p036451 | orthology | 1 | 2 | - | - |
medtr_pan_p019182 | orthology | 0.22 | 1 | 376 | 4.27e-129 |