Gene cicar_pan_p018098


Sequence ID cicar_pan_p018098  add to my list
Species Cicer arietinum
Alias No gene alias
Pangenome status Core (2/2)
Length 147aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 147 amino acids

>cicar_pan_p018098_CICAR
MGVLDKLSDYFSVSPITRKKRKPMQTVEIKVKMDCDGCERRVRNSVAYMKGVKQVEVNRK
ESKVSVSGYVDGNRVLKKIQSTGKRAEFWPYIPYNLVAYPYIAQAYDKKAPPGYVKNTMQ
ALPSPNAMDEKLTNLFSDENPNACSIM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015397		 Heavy metal transport/detoxification group1
3 GP040065 Unannotated cluster
4 GP463678 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for cicar_pan_p018098



Represented sequence(s):
CICAR_CDC_Frontier_kabuli
cicar.CDCFrontier.gnm1.ann1.Ca_13140.1
CICAR_ICC_4958_desi
cicar.ICC4958.gnm2.ann1.Ca_10898.1
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
medtr_pan_p006344 orthology 0.146 1 259 1.38e-90